Kantian ethical theory distinguishes three levels: First, that of a fundamental principle (the categorical imperative, formulated in three main ways in Kant's Groundwork); second, a set of duties, not deduced from but derived from this principle, by way of its interpretation or specification, its application to the general conditions of human life - which Kant does in the Doctrine of virtue, the second main part of the Metaphysics of Morals; and then finally an act of judgment, through which these duties are applied to particular cases.
Kant's treatments of rational theology and metaphysics were aimed primarily at theoretical questions. His attitude toward the pseudo-sciences of "special metaphysics" in Wolff and Baumgarten was always double-edged. He did see them as pseudo-sciences but also valued their doctrinal value and especially their regulative value for the empirical sciences. Like his views about religion, I don't think any of this is any longer viable in its original form.
Kant can provide, and has provided, a good model for philosophers to think about the relation of metaphysics to science and scientific methodology.
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